Reuters/John Sibley
Clarkson, who has built a brand around making loud, reactionary, over-the-top comments, described the decision to change genders as a child or young adult as a "whim" before relaying an anecdote in which he was "horrified" that a parent had "indulged" their child, allowing them to dress as a female.
The column said:
"It's what kids do: dream impossible dreams. You don't actually take them seriously. You don't take them to a hospital when they're 10 and say, 'He wants to be a girl, so can you lop his todger off?'
The reaction to Clarkson from LGBT activists, especially on Twitter, was swift, with many calling for him to be sacked by Amazon. A Change.org petition was created urging Amazon CEO Jeff Bezos to take action.
The company has not yet responded to a request for comment.
According to Amazon's code of conduct, the company provides "equal opportunity in all aspects of employment" and "will not tolerate any illegal discrimination or harassment of any kind."
Amazon Prime Video
According to reports, Amazon paid around $250 million (£175 million) for a new TV show, fronted by Clarkson, James May, and Richard Hammond, who previously worked on "Top Gear." Clarkson is set to get around £10 million ($14 million) per year from the show, which will air on Amazon Prime. Clarkson has also appeared in a series of adverts for Amazon, promoting the Kindle Fire TV.
Clarkson was fired from the BBC after assaulting a producer, who later went on to sue the TV personality for racial discrimination.
Matt Lucas, a performer who has produced hit TV shows for the BBC, tweeted that Clarkson was "your out-of-touch grandpa."
Batty, transphobic article by Clarkson in The Times today. He's like your out-of-touch grandpa.
- Matt Lucas (@RealMattLucas) January 24, 2016
Parents aren't forcing kids to be transgender. The overwhelming majority of trans people have had to fight to be accepted by their families.
- Paris Lees (@ParisLees) January 24, 2016
My father bullied me for years, hitting me and criticising me to try and make me macho. Trans kids need love and acceptance @JeremyClarkson
- Paris Lees (@ParisLees) January 24, 2016
I will never, ever understand why some people use their time on this earth to make life more difficult for other people rather than better.
- Paris Lees (@ParisLees) January 24, 2016
I'd also like to invite @JeremyClarkson to look at the 48% of young trans people in Britain who've attempted suicide https://t.co/JMBCWn68On
- Paris Lees (@ParisLees) January 24, 2016
Confusing why @Amazon_Studios who produced brilliant @transparent_tv would fund hateful transphobic Jeremy Clarkson.
- Richard Fry (@RichFryUK) January 25, 2016
BBC