Some members were also heard shouting slogans such as 'We want justice'.
Speaker Om Birla told the protesting members that all issues can be discussed and urged them to uphold the decorum of the House.
He also wondered whether the Opposition did not want to discuss the Manipur issue.
Amid the din, three questions and their supplementaries were taken up during Question Hour that lasted less than 20 minutes.
As the protests continued, proceedings were adjourned till 12 noon
Earlier in the morning, Birla paid tributes to those who died in the Kargil war on the occasion of the 24th Kargil Vijay Diwas.
The House also stood in silence briefly as a mark of respect for the departed souls.
With the deadlock over the Manipur violence continuing, the 26-member opposition alliance INDIA is planning to submit a notice for a no-confidence motion against the government in Lok Sabha.
Parliamentary proceedings have been disrupted since the start of the Monsoon session on July 20 as the Opposition has been demanding a statement from Prime Minister Narendra Modi on the Manipur violence.
Union ministers Amit Shah, Nitin Gadkari and Pralhad Joshi were among those present in the House during Question Hour on Wednesday. PTI RAM http://ptinews.com/images/pti.jpg "We bring the World to you" Disclaimer : This e-mail message may contain proprietary, confidential or legally privileged information for the sole use of the person or entity to whom this message was originally addressed. Please delete this e-mail, if it is not meant for you. MIN MIN